EnhancerDB
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  3. rs541921700[chr17:55636193]
Enhancers that have rs541921700[chr17:55636193]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541921700[chr17:55636193]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55636181 55636195 PLAG1 JASPAR yes 54969449
chr17 55636188 55636193 SP1 TRANSFAC yes 54969450
chr17 55636189 55636194 SP1 TRANSFAC yes 54969451
chr17 55636189 55636198 THAP1 JASPAR yes 54969452
chr17 55636192 55636196 LFA1 TRANSFAC yes 54969453
Genes associated with rs541921700[chr17:55636193], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More