EnhancerDB
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  3. rs541932712[chr17:55966676]
Enhancers that have rs541932712[chr17:55966676]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55962618 55979623 enh17245
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Thyroid Adrenal Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs541932712[chr17:55966676]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55966668 55966682 PLAG1 JASPAR yes 54995353
chr17 55966669 55966679 SP1 JASPAR yes 54995354
chr17 55966670 55966680 SP1 JASPAR yes 54995355
Genes associated with rs541932712[chr17:55966676], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More