EnhancerDB
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  3. rs541956409[chr1:113540989]
Enhancers that have rs541956409[chr1:113540989]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 113523667 113552555 enh569
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Ovary Blood (OCI-LY7) Stomach Muscle (A673) Blood (Karpas-422) Lung (PC-9) Spleen Muscle (Myotube) Uterus Heart
chr1 113540056 113542020 vista99
VISTA
Transcript factors that have rs541956409[chr1:113540989]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 113539548 113541697 ZNF143 GTRD no Epithelial (MCF-7) 107686531
chr1 113540989 113540994 SP1 TRANSFAC yes 31605683
chr1 113540989 113540994 SP1 TRANSFAC yes 71146178
Genes associated with rs541956409[chr1:113540989], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More