EnhancerDB
  1. Home
  2. SNP
  3. rs541961029[chr2:223967312]
Enhancers that have rs541961029[chr2:223967312]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 223952805 223969224 enh34313
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Ovary Astrocyte Stomach Muscle (A673) Thyroid Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs541961029[chr2:223967312]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 223967297 223967318 IRF1 JASPAR yes 81240647
chr2 223967301 223967316 PRDM1 JASPAR yes 81240648
chr2 223967309 223967319 TBX21 JASPAR yes 81240649
chr2 223967309 223967320 TBX20 JASPAR yes 81240650
chr2 223967309 223967320 TBX2 JASPAR yes 81240651
chr2 223967309 223967322 EOMES JASPAR yes 81240652
chr2 223967310 223967318 MGA JASPAR yes 81240653
chr2 223967310 223967318 TBX15 JASPAR yes 81240654
chr2 223967310 223967318 TBX1 JASPAR yes 81240655
chr2 223967310 223967318 TBX4 JASPAR yes 81240656
chr2 223967310 223967318 TBX5 JASPAR yes 81240657
chr2 223967310 223967320 TBR1 JASPAR yes 81240658
Genes associated with rs541961029[chr2:223967312], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More