EnhancerDB
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  3. rs541969456[chr16:85588068]
Enhancers that have rs541969456[chr16:85588068]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541969456[chr16:85588068]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85586601 85591170 POLR2A UCSC Txn Factor no Conserved 108215987
chr16 85586601 85591170 POLR2A UCSC Txn Factor no Conserved 108215988
chr16 85586727 85588150 TCF7L2 UCSC Txn Factor no Conserved 108215993
chr16 85586727 85588150 TCF7L2 UCSC Txn Factor no Conserved 108215994
chr16 85586852 85588416 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728747
chr16 85586852 85588416 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108216017
chr16 85586933 85588513 TCF7L2 GTRD no Colon (HCT116) 21728775
chr16 85586933 85588513 TCF7L2 GTRD no Colon (HCT116) 108216052
chr16 85587121 85591521 ZNF274 GTRD no Bone Marrow (K562) 21728824
chr16 85587121 85591521 ZNF274 GTRD no Bone Marrow (K562) 108216104
chr16 85587121 85591521 ZNF274 GTRD no Bone Marrow (K562) 108216105
chr16 85587139 85588608 ZNF274 GTRD no Bone Marrow (K562) 21728827
chr16 85587139 85588608 ZNF274 GTRD no Bone Marrow (K562) 108216109
chr16 85587171 85588378 TCF7L2 GTRD no Colon (HCT116) 21728830
chr16 85587171 85588378 TCF7L2 GTRD no Colon (HCT116) 108216112
chr16 85587192 85588449 ZNF274 GTRD no Bone Marrow (K562) 21728832
chr16 85587192 85588449 ZNF274 GTRD no Bone Marrow (K562) 108216114
chr16 85587224 85588478 ZNF143 GTRD no Epithelial (MCF-7) 21728835
chr16 85587224 85588478 ZNF143 GTRD no Epithelial (MCF-7) 108216117
chr16 85587275 85588945 ZNF274 GTRD no Bone Marrow (K562) 21728837
chr16 85587275 85588945 ZNF274 GTRD no Bone Marrow (K562) 108216119
chr16 85587317 85588589 ZNF143 GTRD no Epithelial (MCF-7) 21728838
chr16 85587317 85588589 ZNF143 GTRD no Epithelial (MCF-7) 108216120
chr16 85587338 85588437 TCF7L2 GTRD no Colon (HCT116) 21728840
chr16 85587338 85588437 TCF7L2 GTRD no Colon (HCT116) 108216122
chr16 85587373 85588465 TCF7L2 GTRD no Colon (HCT116) 21728842
chr16 85587373 85589674 ZNF274 GTRD no Bone Marrow (K562) 21728843
chr16 85587390 85589479 TCF7L2 GTRD no Colon (HCT116) 21728845
chr16 85587462 85591088 ZNF274 GTRD no Bone Marrow (K562) 21728847
chr16 85587505 85588297 TCF7L2 GTRD no Colon (HCT116) 21728848
chr16 85587513 85588109 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21728849
chr16 85587568 85588144 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21728851
chr16 85587579 85588155 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728852
chr16 85587583 85588123 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21728854
chr16 85587585 85588101 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21728855
chr16 85587607 85588183 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21728858
chr16 85587621 85588171 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728860
chr16 85587650 85588114 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21728862
chr16 85587654 85588150 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21728863
chr16 85587667 85588083 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728865
chr16 85587675 85588199 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21728867
chr16 85587685 85588081 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21728869
chr16 85587691 85588109 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21728870
chr16 85587700 85588104 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21728871
chr16 85587701 85588097 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728872
chr16 85587707 85588143 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728875
chr16 85587708 85588164 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728876
chr16 85587730 85588106 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728880
chr16 85587738 85588094 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21728881
chr16 85587757 85588221 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21728889
chr16 85587765 85588101 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21728892
chr16 85587771 85588081 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21728895
chr16 85587778 85588148 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728897
chr16 85587791 85588361 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21728903
chr16 85587814 85588437 ZNF274 GTRD no Bone Marrow (K562) 21728910
chr16 85587824 85588095 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728912
chr16 85587853 85588309 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21728913
chr16 85587866 85588336 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21728915
chr16 85587868 85588198 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21728916
chr16 85587880 85588254 ZNF274 GTRD no Bone Marrow (K562) 21728917
chr16 85587906 85588262 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728918
chr16 85587971 85588475 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728919
chr16 85587980 85588476 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728920
chr16 85588050 85588421 ZNF274 GTRD no Bone Marrow (K562) 21728921
chr16 85588064 85588075 STAT3 JASPAR yes 12075991
Genes associated with rs541969456[chr16:85588068], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More