EnhancerDB
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  3. rs541974506[chr17:55450692]
Enhancers that have rs541974506[chr17:55450692]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55440094 55459475 enh17241
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541974506[chr17:55450692]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55448417 55457368 ZBTB33 GTRD no Lung (A549) 108273940
chr17 55448498 55457254 ZBTB33 GTRD no Lung (A549) 108273941
chr17 55450690 55450698 DLX6 JASPAR yes 54947871
chr17 55450690 55450698 MSX1 JASPAR yes 54947872
chr17 55450692 55450705 ATF4 JASPAR yes 54947873
chr17 55450692 55450707 JUND JASPAR yes 54947874
Genes associated with rs541974506[chr17:55450692], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More