EnhancerDB
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  3. rs541978238[chr2:38934188]
Enhancers that have rs541978238[chr2:38934188]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs541978238[chr2:38934188]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38934187 38934199 NHLH1 JASPAR yes 73167856
chr2 38934188 38934198 MSC JASPAR yes 73167857
chr2 38934188 38934198 NHLH1 JASPAR yes 73167858
Genes associated with rs541978238[chr2:38934188], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More