EnhancerDB
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  3. rs541999307[chr15:58816045]
Enhancers that have rs541999307[chr15:58816045]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 58795205 58823435 enh16178
Bone Marrow (K562) Liver Astrocyte Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs541999307[chr15:58816045]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 58815651 58816624 ZNF143 GTRD no Epithelial (MCF-7) 21655388
chr15 58815651 58816624 ZNF143 GTRD no Epithelial (MCF-7) 108141047
chr15 58815705 58816718 ZNF143 GTRD no Epithelial (MCF-7) 21655389
chr15 58815705 58816718 ZNF143 GTRD no Epithelial (MCF-7) 108141048
chr15 58815740 58816581 ZNF143 GTRD no Epithelial (MCF-7) 21655390
chr15 58815740 58816581 ZNF143 GTRD no Epithelial (MCF-7) 108141049
chr15 58816025 58816046 ZNF263 JASPAR yes 23683806
chr15 58816035 58816046 E2F6 JASPAR yes 23683808
Genes associated with rs541999307[chr15:58816045], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More