EnhancerDB
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  3. rs542002685[chr1:229284392]
Enhancers that have rs542002685[chr1:229284392]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229225622 229286295 enh12760
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Esophagus Liver Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs542002685[chr1:229284392]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229283804 229284420 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21390513
chr1 229284387 229284397 SMAD3 JASPAR yes 35967089
Genes associated with rs542002685[chr1:229284392], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More