EnhancerDB
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  3. rs542043219[chr1:27895268]
Enhancers that have rs542043219[chr1:27895268]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs542043219[chr1:27895268]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27895259 27895272 SMAD2 JASPAR yes 27710265
chr1 27895266 27895277 TFAP2A JASPAR yes 27710267
chr1 27895266 27895277 TFAP2B JASPAR yes 27710268
chr1 27895266 27895277 TFAP2C JASPAR yes 27710269
Genes associated with rs542043219[chr1:27895268], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More