EnhancerDB
  1. Home
  2. SNP
  3. rs542083853[chr6:106230608]
Enhancers that have rs542083853[chr6:106230608]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 106226176 106267255 enh23455
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen
Transcript factors that have rs542083853[chr6:106230608]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 106230594 106230608 RXRB JASPAR yes 103979790
chr6 106230594 106230608 RXRG JASPAR yes 103979791
Genes associated with rs542083853[chr6:106230608], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More