EnhancerDB
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  3. rs542098131[chr1:1613933]
Enhancers that have rs542098131[chr1:1613933]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1607365 1622353 enh2
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs542098131[chr1:1613933]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1613913 1613933 RREB1 JASPAR yes 26198450
chr1 1613914 1613934 RREB1 JASPAR yes 26198451
Genes associated with rs542098131[chr1:1613933], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More