EnhancerDB
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  3. rs542137252[chr10:33421725]
Enhancers that have rs542137252[chr10:33421725]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 33393842 33437095 enh1172
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs542137252[chr10:33421725]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 33421594 33421824 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21428552
chr10 33421601 33421891 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21428553
chr10 33421604 33421874 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21428554
chr10 33421669 33421768 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21428555
chr10 33421675 33421764 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21428556
chr10 33421708 33422105 ZNF274 GTRD no Liver (HepG2) 21428557
chr10 33421721 33421740 CTCF JASPAR yes 126574836
chr10 33421724 33421738 ZIC1 JASPAR yes 126574837
chr10 33421724 33421739 ZIC3 JASPAR yes 126574838
chr10 33421724 33421739 ZIC4 JASPAR yes 126574839
Genes associated with rs542137252[chr10:33421725], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More