EnhancerDB
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  3. rs542138636[chr1:232078441]
Enhancers that have rs542138636[chr1:232078441]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232052045 232079775 enh12783
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs542138636[chr1:232078441]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232078424 232078445 IRF1 JASPAR yes 36126173
chr1 232078426 232078441 FOXP1 JASPAR yes 36126175
chr1 232078428 232078449 IRF1 JASPAR yes 36126176
chr1 232078429 232078444 FOXP1 JASPAR yes 36126177
chr1 232078430 232078451 IRF1 JASPAR yes 36126178
chr1 232078433 232078454 IRF1 JASPAR yes 36126180
chr1 232078434 232078449 FOXP1 JASPAR yes 36126181
chr1 232078437 232078458 IRF1 JASPAR yes 36126182
chr1 232078438 232078453 FOXP1 JASPAR yes 36126183
Genes associated with rs542138636[chr1:232078441], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More