EnhancerDB
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  3. rs542143823[chr6:34577718]
Enhancers that have rs542143823[chr6:34577718]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 34574305 34581193 enh38949
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542143823[chr6:34577718]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 34577707 34577724 RXRA JASPAR yes 101224683
chr6 34577715 34577728 NR2F1 JASPAR yes 101224685
Genes associated with rs542143823[chr6:34577718], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More