EnhancerDB
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  3. rs542149787[chr17:71299801]
Enhancers that have rs542149787[chr17:71299801]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 71282705 71302156 enh17360
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542149787[chr17:71299801]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 71299799 71299814 FOXP1 JASPAR yes 55860661
chr17 71299800 71299815 FOXP1 JASPAR yes 55860662
chr17 71299800 71299821 IRF1 JASPAR yes 55860663
chr17 71299801 71299816 FOXP1 JASPAR yes 55860664
chr17 71299801 71299822 IRF1 JASPAR yes 55860665
Genes associated with rs542149787[chr17:71299801], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More