EnhancerDB
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  3. rs542159847[chr1:224391710]
Enhancers that have rs542159847[chr1:224391710]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542159847[chr1:224391710]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224390131 224391897 TEF1 GTRD no Bone (Osteoblast) 21384202
chr1 224391271 224391841 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21384206
chr1 224391344 224391814 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21384207
chr1 224391415 224394417 ZNF274 GTRD no Bone Marrow (K562) 21384208
chr1 224391415 224394417 ZNF274 GTRD no Bone Marrow (K562) 107873609
Genes associated with rs542159847[chr1:224391710], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More