EnhancerDB
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  3. rs542170720[chr12:92173494]
Enhancers that have rs542170720[chr12:92173494]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 92164305 92177155 enh14875
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Ovary Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542170720[chr12:92173494]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 92170145 92173899 ZNF274 GTRD no Blood (GM12878) 108048869
chr12 92170145 92173899 ZNF274 GTRD no Blood (GM12878) 108048870
chr12 92171044 92173809 ZNF274 GTRD no Blood (GM12878) 108048871
chr12 92171044 92173809 ZNF274 GTRD no Blood (GM12878) 108048872
chr12 92171405 92173580 ZNF274 GTRD no Blood (GM12878) 108048875
chr12 92171405 92173580 ZNF274 GTRD no Blood (GM12878) 108048876
chr12 92171655 92173547 ZNF274 GTRD no Blood (GM12878) 108048881
chr12 92171655 92173547 ZNF274 GTRD no Blood (GM12878) 108048882
chr12 92173153 92173529 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21561346
chr12 92173153 92173529 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108049030
chr12 92173487 92173500 POU2F2 JASPAR yes 122703878
chr12 92173487 92173501 POU1F1 JASPAR yes 122703879
chr12 92173487 92173502 LEF1 JASPAR yes 122703880
Genes associated with rs542170720[chr12:92173494], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More