EnhancerDB
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  3. rs542177249[chr1:225959170]
Enhancers that have rs542177249[chr1:225959170]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225938095 225960315 enh12725
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542177249[chr1:225959170]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225959161 225959182 IRF1 JASPAR yes 35770302
chr1 225959164 225959178 SPI1 JASPAR yes 35770303
chr1 225959164 225959185 IRF1 JASPAR yes 35770304
chr1 225959165 225959186 IRF1 JASPAR yes 35770305
chr1 225959167 225959182 FOXP1 JASPAR yes 35770306
chr1 225959169 225959184 FOXP1 JASPAR yes 35770307
chr1 225959170 225959185 FOXP1 JASPAR yes 35770308
Genes associated with rs542177249[chr1:225959170], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More