EnhancerDB
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  3. rs542193139[chr14:50535826]
Enhancers that have rs542193139[chr14:50535826]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 50522965 50540151 enh3176
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542193139[chr14:50535826]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 50535821 50535836 FOXP1 JASPAR yes 115227534
chr14 50535821 50535842 IRF1 JASPAR yes 115227535
chr14 50535822 50535843 IRF1 JASPAR yes 115227536
chr14 50535823 50535835 FOXC2 JASPAR yes 115227537
chr14 50535825 50535840 FOXP1 JASPAR yes 115227538
Genes associated with rs542193139[chr14:50535826], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More