EnhancerDB
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  3. rs542228547[chr6:31041168]
Enhancers that have rs542228547[chr6:31041168]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 31022954 31045508 enh38944
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Muscle (A673) Colon (HCT116) Thyroid Uterus Lung (PC-9) Breast Spleen Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs542228547[chr6:31041168]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 31041161 31041172 CDX2 JASPAR yes 101071510
chr6 31041162 31041173 HOXA10 JASPAR yes 101071511
chr6 31041163 31041172 CDX1 JASPAR yes 101071512
chr6 31041163 31041173 HOXA13 JASPAR yes 101071513
chr6 31041163 31041173 HOXB13 JASPAR yes 101071514
chr6 31041163 31041173 HOXD13 JASPAR yes 101071515
Genes associated with rs542228547[chr6:31041168], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More