EnhancerDB
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  3. rs542239135[chr19:13283193]
Enhancers that have rs542239135[chr19:13283193]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13265805 13289518 enh17931
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542239135[chr19:13283193]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13282948 13283312 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851408
chr19 13282957 13283607 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851409
chr19 13282968 13283244 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851410
chr19 13283052 13283582 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851411
chr19 13283054 13283630 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851412
chr19 13283068 13283584 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851413
chr19 13283079 13283543 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21851414
chr19 13283109 13283619 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851415
chr19 13283110 13283554 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21851416
chr19 13283140 13283651 TCF7L2 GTRD no Colon (HCT116) 21851417
chr19 13283141 13283566 ZNF274 GTRD no Bone Marrow (K562) 21851418
chr19 13283148 13283618 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21851419
chr19 13283150 13283514 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851420
chr19 13283152 13283722 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21851421
chr19 13283158 13283808 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851422
chr19 13283163 13283533 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851423
chr19 13283163 13283713 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851424
chr19 13283165 13283541 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851425
chr19 13283176 13283520 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851426
chr19 13283179 13283575 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851427
Genes associated with rs542239135[chr19:13283193], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More