EnhancerDB
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  3. rs542240979[chr6:11599999]
Enhancers that have rs542240979[chr6:11599999]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11583745 11623555 enh23028
Brain (SK-N-MC) Astrocyte Uterus Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs542240979[chr6:11599999]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11599993 11600005 YY1 JASPAR yes 99898965
chr6 11599997 11600008 CEBPB JASPAR yes 99898966
chr6 11599998 11600011 NFKB1 JASPAR yes 99898967
chr6 11599998 11600011 NFKB2 JASPAR yes 99898968
Genes associated with rs542240979[chr6:11599999], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More