EnhancerDB
  1. Home
  2. SNP
  3. rs542254409[chr17:76325845]
Enhancers that have rs542254409[chr17:76325845]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76316725 76355075 enh17407
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 76325206 76325964 vista26186
VISTA
Transcript factors that have rs542254409[chr17:76325845]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76325219 76325899 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21793431
chr17 76325219 76325899 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108301978
chr17 76325239 76325889 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21793432
chr17 76325239 76325889 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108301979
chr17 76325285 76326096 POLR2A UCSC Txn Factor no Conserved 108301980
chr17 76325293 76325869 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21793433
chr17 76325293 76325869 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108301982
chr17 76325441 76325957 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21793441
chr17 76325441 76325957 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108301991
chr17 76325464 76325928 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21793444
chr17 76325464 76325928 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108301994
chr17 76325471 76325855 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21793445
chr17 76325471 76325855 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108301995
chr17 76325473 76325869 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21793446
chr17 76325473 76325869 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108301996
chr17 76325511 76325942 TCF7L2 GTRD no Colon (HCT116) 21793449
chr17 76325511 76325942 TCF7L2 GTRD no Colon (HCT116) 108301999
chr17 76325670 76326266 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21793456
chr17 76325670 76326266 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108302007
chr17 76325841 76325847 SP1 TRANSFAC yes 21306971
chr17 76325841 76325847 SP1 TRANSFAC yes 56147992
chr17 76325841 76325851 SP1 JASPAR yes 21306972
chr17 76325841 76325851 SP1 JASPAR yes 56147993
Genes associated with rs542254409[chr17:76325845], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More