EnhancerDB
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  3. rs542255691[chr1:25062839]
Enhancers that have rs542255691[chr1:25062839]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542255691[chr1:25062839]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25062819 25062839 RREB1 JASPAR yes 27525335
chr1 25062821 25062841 RREB1 JASPAR yes 27525336
chr1 25062839 25062850 NRF1 JASPAR yes 27525337
Genes associated with rs542255691[chr1:25062839], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More