EnhancerDB
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  3. rs542278313[chr17:55635001]
Enhancers that have rs542278313[chr17:55635001]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542278313[chr17:55635001]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55634989 55635008 CTCF JASPAR yes 54969322
chr17 55634992 55635002 MZF1 JASPAR yes 54969323
chr17 55634998 55635013 RFX5 JASPAR yes 54969324
Genes associated with rs542278313[chr17:55635001], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More