EnhancerDB
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  3. rs542280671[chr11:61393827]
Enhancers that have rs542280671[chr11:61393827]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 61360185 61399298 enh13959
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542280671[chr11:61393827]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 61391367 61393972 ZNF274 GTRD no Liver (HepG2) 21486569
chr11 61391981 61394036 ZNF143 GTRD no Epithelial (MCF-7) 21486604
chr11 61392050 61393921 ZNF143 GTRD no Epithelial (MCF-7) 21486613
chr11 61392094 61393835 ZNF143 GTRD no Epithelial (MCF-7) 21486620
chr11 61392320 61394034 ZNF143 GTRD no Epithelial (MCF-7) 21486657
chr11 61392974 61393974 ZNF274 GTRD no Cervix (HeLa-S3) 21486676
chr11 61393819 61393840 IRF1 JASPAR yes 39153464
chr11 61393821 61393842 IRF1 JASPAR yes 39153465
chr11 61393823 61393844 IRF1 JASPAR yes 39153466
chr11 61393824 61393839 FOXP1 JASPAR yes 39153467
chr11 61393826 61393841 FOXP1 JASPAR yes 39153468
chr11 61393827 61393842 FOXP1 JASPAR yes 39153469
Genes associated with rs542280671[chr11:61393827], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More