EnhancerDB
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  3. rs542282894[chr17:57919954]
Enhancers that have rs542282894[chr17:57919954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57915645 57936791 enh17263
Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542282894[chr17:57919954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57914548 57924655 POLR2A UCSC Txn Factor no Conserved 107688742
chr17 57914548 57924655 POLR2A UCSC Txn Factor no Conserved 108278238
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 21776393
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 107688870
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 108278239
chr17 57916673 57921496 ZNF143 GTRD no Epithelial (MCF-7) 21776429
chr17 57916673 57921496 ZNF143 GTRD no Epithelial (MCF-7) 107689020
chr17 57919204 57920984 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776532
chr17 57919213 57919955 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776533
chr17 57919480 57919980 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776534
chr17 57919554 57919974 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776539
chr17 57919699 57920199 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776541
chr17 57919747 57920067 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776542
chr17 57919754 57920124 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776543
chr17 57919783 57920099 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776544
chr17 57919787 57919965 ZNF274 GTRD no Liver (HepG2) 21776545
chr17 57919830 57922162 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776546
chr17 57919845 57920105 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776547
chr17 57919853 57920381 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776548
chr17 57919853 57920443 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776549
chr17 57919863 57923596 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108278240
chr17 57919873 57920237 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776550
chr17 57919888 57921264 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776551
chr17 57919892 57920232 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776552
chr17 57919909 57920229 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776553
chr17 57919915 57920205 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776554
chr17 57919927 57920605 ZNF143 GTRD no Epithelial (MCF-7) 21776555
chr17 57919933 57920233 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776556
chr17 57919935 57920199 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776557
chr17 57919945 57919955 NFKB1 JASPAR yes 55087625
chr17 57919947 57919964 BCL6B JASPAR yes 55087626
Genes associated with rs542282894[chr17:57919954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More