EnhancerDB
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  3. rs542294141[chr17:48933334]
Enhancers that have rs542294141[chr17:48933334]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48919785 48943275 enh4463
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs542294141[chr17:48933334]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48931250 48934095 ZNF274 GTRD no Liver (HepG2) 21770003
chr17 48932988 48933366 ZNF143 GTRD no Epithelial (MCF-7) 21770007
chr17 48933006 48933793 ZNF143 GTRD no Epithelial (MCF-7) 21770008
chr17 48933067 48933360 ZNF143 GTRD no Epithelial (MCF-7) 21770009
chr17 48933136 48933752 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770011
chr17 48933225 48933769 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770012
chr17 48933329 48933709 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770013
chr17 48933332 48933342 TEAD1 JASPAR yes 54725993
chr17 48933332 48933342 TEAD4 JASPAR yes 54725994
chr17 48933333 48933341 TEAD3 JASPAR yes 54725995
Genes associated with rs542294141[chr17:48933334], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More