EnhancerDB
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  3. rs542294511[chr16:85541866]
Enhancers that have rs542294511[chr16:85541866]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542294511[chr16:85541866]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85540616 85542267 TCF7L2 GTRD no Colon (HCT116) 21726626
chr16 85540722 85541952 TCF7L2 GTRD no Colon (HCT116) 21726627
chr16 85540784 85542331 TCF7L2 GTRD no Colon (HCT116) 21726628
chr16 85540893 85542980 ZNF143 GTRD no Epithelial (MCF-7) 21726629
chr16 85540945 85542892 ZNF274 GTRD no Bone Marrow (K562) 21726630
chr16 85540950 85542944 ZNF143 GTRD no Epithelial (MCF-7) 21726631
chr16 85540987 85541977 ZNF143 GTRD no Epithelial (MCF-7) 21726632
chr16 85541053 85541948 ZNF274 GTRD no Bone Marrow (K562) 21726633
chr16 85541368 85543039 ZNF274 GTRD no Bone Marrow (K562) 21726634
chr16 85541390 85543047 ZNF274 GTRD no Bone Marrow (K562) 21726635
chr16 85541501 85543033 ZNF274 GTRD no Bone Marrow (K562) 21726636
chr16 85541615 85542268 ZNF274 GTRD no Bone Marrow (K562) 21726637
chr16 85541666 85542312 ZNF143 GTRD no Epithelial (MCF-7) 21726638
chr16 85541670 85543039 ZNF274 GTRD no Bone Marrow (K562) 21726639
chr16 85541674 85543046 ZNF274 GTRD no Bone Marrow (K562) 21726640
chr16 85541677 85543731 ZNF274 GTRD no Bone Marrow (K562) 21726641
chr16 85541678 85543019 ZNF274 GTRD no Bone Marrow (K562) 21726642
chr16 85541783 85542805 ZNF274 GTRD no Bone Marrow (K562) 21726643
chr16 85541784 85541969 ZNF274 GTRD no Bone Marrow (K562) 21726644
chr16 85541815 85542904 ZNF143 GTRD no Epithelial (MCF-7) 21726645
chr16 85541831 85542928 ZNF143 GTRD no Epithelial (MCF-7) 21726646
chr16 85541859 85541874 NR2C2 JASPAR yes 12069736
chr16 85541862 85541875 NR2F1 JASPAR yes 12069737
chr16 85541866 85541874 CREB1 JASPAR yes 12069738
Genes associated with rs542294511[chr16:85541866], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More