EnhancerDB
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  3. rs542309674[chr1:212463026]
Enhancers that have rs542309674[chr1:212463026]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212456045 212470579 enh910
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Uterus Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Neural Stem Cells (H9) Stomach
Transcript factors that have rs542309674[chr1:212463026]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212463017 212463031 POU4F1 JASPAR yes 35118367
chr1 212463017 212463033 POU4F3 JASPAR yes 35118368
chr1 212463025 212463034 NKX2-8 JASPAR yes 35118369
chr1 212463025 212463035 NKX2-3 JASPAR yes 35118370
chr1 212463026 212463034 ISL2 JASPAR yes 35118371
chr1 212463026 212463035 NKX3-2 JASPAR yes 35118372
Genes associated with rs542309674[chr1:212463026], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More