EnhancerDB
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  3. rs542317599[chr17:56459098]
Enhancers that have rs542317599[chr17:56459098]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56450725 56479661 enh4499
Bone Marrow (K562) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Liver (HepG2)
Transcript factors that have rs542317599[chr17:56459098]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56459084 56459099 MEF2C JASPAR yes 55015698
chr17 56459085 56459100 MEF2A JASPAR yes 55015699
chr17 56459086 56459098 MEF2A JASPAR yes 55015702
chr17 56459086 56459098 MEF2B JASPAR yes 55015703
chr17 56459086 56459098 MEF2D JASPAR yes 55015704
chr17 56459087 56459099 FOXI1 JASPAR yes 55015706
chr17 56459092 56459110 SRF JASPAR yes 55015710
chr17 56459094 56459112 SRF JASPAR yes 55015711
chr17 56459097 56459106 SRF TRANSFAC yes 55015712
chr17 56459097 56459109 SRF JASPAR yes 55015713
chr17 56459098 56459108 HOXD13 JASPAR yes 55015714
chr17 56459098 56459109 HOXA10 JASPAR yes 55015715
Genes associated with rs542317599[chr17:56459098], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More