EnhancerDB
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  3. rs542344662[chr1:205283143]
Enhancers that have rs542344662[chr1:205283143]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205280105 205289755 enh12590
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Heart
chr1 205283024 205283394 vista4735
VISTA
Transcript factors that have rs542344662[chr1:205283143]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205282650 205283170 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861946
chr1 205282658 205283318 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861947
chr1 205282683 205283259 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107861948
chr1 205282698 205283238 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107861949
chr1 205282704 205283224 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861950
chr1 205282809 205283189 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861956
chr1 205282829 205283185 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861958
chr1 205282861 205283159 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861959
chr1 205282888 205283213 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861960
chr1 205282888 205283217 EBF1 UCSC Txn Factor no Conserved 107861961
chr1 205282899 205283269 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21371757
chr1 205282899 205283269 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107861964
chr1 205282994 205283594 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21371758
chr1 205282994 205283594 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107861965
chr1 205283008 205283528 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21371759
chr1 205283008 205283528 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107861966
chr1 205283012 205283648 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21371760
chr1 205283012 205283648 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107861967
chr1 205283021 205283316 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21371761
chr1 205283021 205283316 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107861968
chr1 205283021 205283457 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107861969
chr1 205283028 205283404 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21371762
chr1 205283028 205283404 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107861970
chr1 205283030 205283394 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861971
chr1 205283054 205283364 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21371763
chr1 205283054 205283364 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107861972
chr1 205283109 205283433 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21371764
chr1 205283109 205283433 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107861973
chr1 205283115 205283365 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21371765
chr1 205283115 205283365 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107861974
Genes associated with rs542344662[chr1:205283143], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More