EnhancerDB
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  3. rs542349989[chr17:48942254]
Enhancers that have rs542349989[chr17:48942254]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48919785 48943275 enh4463
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs542349989[chr17:48942254]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48942097 48942713 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770025
chr17 48942097 48942713 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108271406
chr17 48942170 48942766 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108271407
Genes associated with rs542349989[chr17:48942254], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More