EnhancerDB
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  3. rs542378061[chr2:27953491]
Enhancers that have rs542378061[chr2:27953491]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27941049 27963575 enh18376
Astrocyte Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr2 27953295 27953592 vista30787
VISTA
Transcript factors that have rs542378061[chr2:27953491]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27953489 27953494 SP1 TRANSFAC yes 22022474
chr2 27953489 27953494 SP1 TRANSFAC yes 72586364
chr2 27953491 27953496 TFAP2A TRANSFAC yes 22022475
chr2 27953491 27953496 TFAP2A TRANSFAC yes 72586365
chr2 27953491 27953497 MZF1 JASPAR yes 22022476
chr2 27953491 27953497 MZF1 JASPAR yes 72586366
Genes associated with rs542378061[chr2:27953491], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More