EnhancerDB
  1. Home
  2. SNP
  3. rs542379349[chr1:9817464]
Enhancers that have rs542379349[chr1:9817464]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9816649 9832635 enh52
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
Transcript factors that have rs542379349[chr1:9817464]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9817460 9817475 HNF1A JASPAR yes 26673785
Genes associated with rs542379349[chr1:9817464], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More