EnhancerDB
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  3. rs542402393[chr2:25540823]
Enhancers that have rs542402393[chr2:25540823]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25506105 25541255 enh18357
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542402393[chr2:25540823]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25540805 25540823 NR3C1 JASPAR yes 72465927
chr2 25540807 25540827 ESR1 JASPAR yes 72465928
Genes associated with rs542402393[chr2:25540823], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More