EnhancerDB
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  3. rs542406242[chr1:54834164]
Enhancers that have rs542406242[chr1:54834164]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54820685 54854719 enh11867
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs542406242[chr1:54834164]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54834156 54834177 IRF1 JASPAR yes 28978710
chr1 54834158 54834173 IRF9 JASPAR yes 28978711
Genes associated with rs542406242[chr1:54834164], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More