EnhancerDB
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  3. rs542446394[chr5:90611779]
Enhancers that have rs542446394[chr5:90611779]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542446394[chr5:90611779]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90611772 90611787 STAT1 JASPAR yes 64192107
chr5 90611773 90611781 FEV JASPAR yes 64192108
chr5 90611774 90611785 STAT3 JASPAR yes 64192109
Genes associated with rs542446394[chr5:90611779], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More