EnhancerDB
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  3. rs542449039[chr17:4756361]
Enhancers that have rs542449039[chr17:4756361]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 4739171 4760073 enh16944
Bone Marrow (K562) Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542449039[chr17:4756361]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 4756080 4756848 RUNX3 UCSC Txn Factor no Conserved 108232834
chr17 4756080 4756848 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108232835
chr17 4756343 4756363 RREB1 JASPAR yes 52858817
chr17 4756347 4756367 RREB1 JASPAR yes 52858818
chr17 4756350 4756370 RREB1 JASPAR yes 52858819
chr17 4756352 4756362 ZNF740 JASPAR yes 52858821
chr17 4756354 4756374 RREB1 JASPAR yes 52858822
chr17 4756356 4756371 RUNX2 JASPAR yes 52858823
chr17 4756357 4756377 RREB1 JASPAR yes 52858824
chr17 4756358 4756378 RREB1 JASPAR yes 52858825
Genes associated with rs542449039[chr17:4756361], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More