EnhancerDB
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  3. rs542474202[chr17:49035259]
Enhancers that have rs542474202[chr17:49035259]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542474202[chr17:49035259]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49035060 49036748 ZNF143 GTRD no Epithelial (MCF-7) 21771875
chr17 49035127 49036359 TCF7L2 GTRD no Colon (HCT116) 21771876
chr17 49035203 49036690 ZNF143 GTRD no Epithelial (MCF-7) 21771877
chr17 49035215 49036454 ZNF143 GTRD no Epithelial (MCF-7) 21771878
chr17 49035215 49036679 ZNF143 GTRD no Epithelial (MCF-7) 21771879
chr17 49035231 49036464 TCF7L2 GTRD no Colon (HCT116) 21771880
chr17 49035241 49036441 TCF7L2 GTRD no Colon (HCT116) 21771881
chr17 49035244 49036768 ZNF143 GTRD no Epithelial (MCF-7) 21771882
chr17 49035257 49036419 ZNF143 GTRD no Epithelial (MCF-7) 21771883
Genes associated with rs542474202[chr17:49035259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More