EnhancerDB
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Enhancers that have rs542479806[chr19:13147237]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13138760 13157647 enh17929
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542479806[chr19:13147237]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13146790 13147752 ZNF274 GTRD no Bone Marrow (K562) 108387596
chr19 13146831 13147752 ZNF274 GTRD no Bone Marrow (K562) 108387597
chr19 13146855 13147861 ZNF274 GTRD no Bone Marrow (K562) 108387598
chr19 13146884 13147923 TCF7L2 GTRD no Colon (HCT116) 21850234
chr19 13146884 13147923 TCF7L2 GTRD no Colon (HCT116) 108387599
chr19 13146926 13147738 ZNF274 GTRD no Bone Marrow (K562) 108387600
chr19 13147013 13147614 CTCF UCSC Txn Factor no Conserved 108387601
chr19 13147039 13147611 ZNF274 GTRD no Bone Marrow (K562) 108387602
chr19 13147039 13147656 ZNF274 GTRD no Blood (GM12878) 108387603
chr19 13147077 13147662 ZNF274 GTRD no Bone Marrow (K562) 108387604
chr19 13147103 13147619 ZBTB33 GTRD no Lung (A549) 108387605
chr19 13147127 13147657 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21850235
chr19 13147127 13147657 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108387606
chr19 13147133 13147648 TCF7L2 GTRD no Colon (HCT116) 21850236
chr19 13147133 13147648 TCF7L2 GTRD no Colon (HCT116) 108387607
chr19 13147135 13147617 ZNF274 GTRD no Bone Marrow (K562) 108387608
chr19 13147135 13147651 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21850237
chr19 13147135 13147651 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108387609
chr19 13147149 13147623 ZNF143 GTRD no Epithelial (MCF-7) 21850238
chr19 13147149 13147623 ZNF143 GTRD no Epithelial (MCF-7) 108387610
chr19 13147172 13147672 ZNF143 GTRD no Epithelial (MCF-7) 21850239
chr19 13147172 13147672 ZNF143 GTRD no Epithelial (MCF-7) 108387611
chr19 13147178 13147606 ZNF274 GTRD no Bone Marrow (K562) 108387612
chr19 13147185 13147783 ZNF274 GTRD no Bone Marrow (K562) 108387613
chr19 13147190 13147626 ZNF274 GTRD no Cervix (HeLa-S3) 21850240
chr19 13147190 13147626 ZNF274 GTRD no Cervix (HeLa-S3) 108387614
chr19 13147196 13147466 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108387615
chr19 13147203 13147433 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21850241
chr19 13147203 13147433 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108387616
chr19 13147208 13147468 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21850242
chr19 13147208 13147468 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108387617
chr19 13147214 13147444 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21850243
chr19 13147214 13147444 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108387618
chr19 13147214 13147458 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108387619
chr19 13147225 13147763 ZNF274 GTRD no Bone Marrow (K562) 108387620
chr19 13147230 13147589 ZNF274 GTRD no Bone Marrow (K562) 108387621
Genes associated with rs542479806[chr19:13147237], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More