EnhancerDB
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  3. rs542484122[chr2:232469867]
Enhancers that have rs542484122[chr2:232469867]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr2 232468888 232470128 vista35158
VISTA
Transcript factors that have rs542484122[chr2:232469867]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232468919 232470064 POLR2A UCSC Txn Factor no Conserved 108435680
chr2 232469862 232469867 SP1 TRANSFAC yes 22229140
chr2 232469862 232469867 SP1 TRANSFAC yes 81724897
Genes associated with rs542484122[chr2:232469867], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More