EnhancerDB
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  3. rs542490249[chr18:55443766]
Enhancers that have rs542490249[chr18:55443766]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55430385 55468195 enh17731
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542490249[chr18:55443766]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55443747 55443767 RREB1 JASPAR yes 110884365
chr18 55443751 55443771 RREB1 JASPAR yes 110884366
chr18 55443758 55443773 RUNX2 JASPAR yes 110884367
chr18 55443759 55443770 RUNX1 JASPAR yes 110884368
chr18 55443763 55443781 ESR1 JASPAR yes 110884369
Genes associated with rs542490249[chr18:55443766], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More