EnhancerDB
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  3. rs542553911[chr5:148286017]
Enhancers that have rs542553911[chr5:148286017]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148282079 148299015 enh22690
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs542553911[chr5:148286017]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148286000 148286021 IRF1 JASPAR yes 66772044
chr5 148286002 148286022 RREB1 JASPAR yes 66772045
chr5 148286005 148286017 IRF1 JASPAR yes 66772046
chr5 148286005 148286020 FOXP1 JASPAR yes 66772047
chr5 148286005 148286026 IRF1 JASPAR yes 66772048
chr5 148286007 148286027 RREB1 JASPAR yes 66772049
chr5 148286010 148286022 IRF1 JASPAR yes 66772050
chr5 148286010 148286025 FOXP1 JASPAR yes 66772051
chr5 148286012 148286032 RREB1 JASPAR yes 66772052
chr5 148286015 148286026 FOXA1 JASPAR yes 66772053
chr5 148286015 148286030 FOXA1 JASPAR yes 66772054
chr5 148286016 148286028 FOXC2 JASPAR yes 66772055
chr5 148286017 148286029 FOXI1 JASPAR yes 66772056
Genes associated with rs542553911[chr5:148286017], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More