EnhancerDB
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  3. rs542562925[chr17:1903466]
Enhancers that have rs542562925[chr17:1903466]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 1888491 1923135 enh16929
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542562925[chr17:1903466]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 1903460 1903466 NFE2 TRANSFAC yes 52715000
chr17 1903464 1903474 ID4 JASPAR yes 52715001
chr17 1903465 1903483 ESR1 JASPAR yes 52715002
Genes associated with rs542562925[chr17:1903466], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More