EnhancerDB
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Enhancers that have rs542580565[chr16:25047875]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 25036065 25069195 enh3955
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542580565[chr16:25047875]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 25047238 25047888 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21699659
chr16 25047668 25051087 ZBTB33 GTRD no Lung (A549) 108189518
chr16 25047687 25050539 ZBTB33 GTRD no Lung (A549) 108189519
chr16 25047835 25050365 ZNF274 GTRD no Blood (GM12878) 21699661
chr16 25047835 25050365 ZNF274 GTRD no Blood (GM12878) 108189520
chr16 25047839 25048295 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21699662
chr16 25047852 25048934 ZNF274 GTRD no Bone Marrow (K562) 21699663
chr16 25047854 25047875 ZNF263 JASPAR yes 10097934
chr16 25047870 25050428 ZNF274 GTRD no Bone Marrow (K562) 21699664
chr16 25047870 25050428 ZNF274 GTRD no Bone Marrow (K562) 108189521
Genes associated with rs542580565[chr16:25047875], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More