EnhancerDB
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  3. rs542586779[chr6:108959445]
Enhancers that have rs542586779[chr6:108959445]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108935865 108963315 enh23479
Bone Marrow (K562) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Liver Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs542586779[chr6:108959445]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108959438 108959452 GLIS2 JASPAR yes 104187549
chr6 108959438 108959452 GLIS3 JASPAR yes 104187550
chr6 108959442 108959452 ZNF740 JASPAR yes 104187551
Genes associated with rs542586779[chr6:108959445], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More