EnhancerDB
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  3. rs542590063[chr1:21666278]
Enhancers that have rs542590063[chr1:21666278]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542590063[chr1:21666278]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21666258 21666279 ZNF263 JASPAR yes 27298473
chr1 21666275 21666288 ELF1 JASPAR yes 27298488
chr1 21666276 21666288 ELF1 JASPAR yes 27298489
chr1 21666278 21666285 ETS1 TRANSFAC yes 27298490
chr1 21666278 21666289 ELK4 JASPAR yes 27298491
Genes associated with rs542590063[chr1:21666278], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More