EnhancerDB
  1. Home
  2. SNP
  3. rs542593444[chr12:50648839]
Enhancers that have rs542593444[chr12:50648839]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50631905 50661889 enh14703
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs542593444[chr12:50648839]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50648819 50648840 IRF1 JASPAR yes 120823195
chr12 50648820 50648841 IRF1 JASPAR yes 120823196
chr12 50648821 50648841 RREB1 JASPAR yes 120823197
chr12 50648824 50648839 FOXP1 JASPAR yes 120823198
chr12 50648824 50648845 IRF1 JASPAR yes 120823199
chr12 50648826 50648846 RREB1 JASPAR yes 120823200
chr12 50648832 50648852 RREB1 JASPAR yes 120823201
chr12 50648835 50648847 ZBTB7B JASPAR yes 120823202
chr12 50648835 50648847 ZBTB7C JASPAR yes 120823203
chr12 50648835 50648850 RUNX2 JASPAR yes 120823204
chr12 50648835 50648855 RREB1 JASPAR yes 120823205
chr12 50648836 50648846 RUNX3 JASPAR yes 120823206
chr12 50648836 50648856 RREB1 JASPAR yes 120823207
chr12 50648837 50648857 RREB1 JASPAR yes 120823208
chr12 50648839 50648859 RREB1 JASPAR yes 120823209
Genes associated with rs542593444[chr12:50648839], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More